
본 연구 논문에서는 대마초(Cannabis sativa) 연구를 위한 다중 오믹스 데이터를 통합하고 분석하기 위해 커뮤니티 기반의 생물정보학 플랫폼을 구축하는 과정을 소개합니다.


coremsg

Global changes in Cannabis legislation after decades of stringent regulation, and heightened demand for its industrial and medicinal applications have spurred recent genetic and genomics research. An international research community emerged and identified the need for a web portal to host Cannabis-specific datasets that seamlessly integrates multiple data sources and serves omics-type analyses, fostering information sharing.

The Tripal platform was used to host public genome assemblies, gene annotations, QTL and genetic maps, gene and protein expression, metabolic profile and their sample attributes. SNPs were called using public resequencing datasets on three genomes. Additional applications, such as SNP-Seek and MapManJS, were embedded into Tripal. A multi-omics data integration web-service API, developed on top of existing Tripal modules, returns generic tables of sample, property, and values. Use-cases demonstrate the API’s utility for various -omics analyses, enabling researchers to perform multi- omics analyses efficiently.

### Competing Interest Statement

The authors have declared no competing interest.

Building a community-driven bioinformatics platform to facilitate Cannabis sativa multi-omics research

커뮤니티-기반-생물정보학-플랫폼-구축을-통한-다중-오믹스-연구-촉진-대마초-연구의-새로운-지평


커뮤니티 기반 생물정보학 플랫폼 구축을 통한 다중 오믹스 연구 촉진: 대마초 연구의 새로운 지평
