Core Concepts
Common adeno-associated viral transduction procedures for expressing genetically encoded calcium indicators in the hippocampus can induce aberrant, spatially confined calcium micro-waves that slowly propagate through the CA1 and CA3 regions.
Abstract
The authors report that common adeno-associated viral (AAV) transduction procedures for expressing genetically encoded calcium indicators (GECIs) like GCaMP6, GCaMP7, or R-CaMP1.07 under the synapsin promoter can induce aberrant, spatially confined calcium micro-waves in the hippocampus. These calcium waves were typically first observed 4 weeks after viral injection, persisted up to at least 8 weeks, and were confined to the CA1 and CA3 regions, but not the dentate gyrus or neocortex.
The occurrence of these calcium waves was robust, observed across multiple laboratories using standard viral transduction and two-photon imaging protocols. The calcium waves were not restricted to a single GECI variant and were also observed with R-CaMP1.07 expression. Reducing the viral transduction titer decreased but did not prevent the occurrence of the calcium waves. In contrast, an alternative viral transduction approach using Cre-dependent sparse GCaMP6 expression in principal neurons avoided the aberrant calcium waves. Transgenic GCaMP mouse lines also did not exhibit these calcium waves.
The authors suggest that the underlying mechanisms likely involve the expression level and density of the calcium indicators, as well as the targeted brain region, with the CA1 and CA3 regions being particularly prone to generating these artefactual calcium waves under certain conditions. They aim to raise awareness in the field about this transduction-induced artefact and provide potential solutions to avoid it when performing in vivo calcium imaging of the hippocampus.
Stats
Hippocampal CA1 pyramidal layer thickness: 49 ± 12.5 µm ipsilateral, 50.3 ± 11.1 µm contralateral
Hippocampal CA1 thickness: 553.3 ± 14 µm ipsilateral, 555.8 ± 62 µm contralateral
Quotes
"Aberrant hippocampal Ca2+ micro-waves following synapsin-dependent adenoviral expression of Ca2+ indicators"
"Common AAV transduction procedures induce artefactual spatially confined Ca2+ waves in the hippocampus."